COMPUTATIONAL BIOLOGY - Selected Publications:

Dal Co A, Lagomarsino MC, Caselle M, Osella M.

Stochastic timing in gene expression for simple regulatory strategies.

Nucleic Acids Res. 2017 Feb 17;45(3):1069-1078.

Orso F et al.

miR-214 and miR-148b Targeting Inhibits Dissemination of Melanoma and Breast Cancer.

Cancer Res. 2016 Sep 1;76(17):5151-62.

Cantini L, Medico E, Fortunato S, Caselle M.

Detection of gene communities in multi-networks reveals cancer drivers.

Sci Rep. 2015 Dec 7;5:17386.

Cantini L et al.

MicroRNA-mRNA interactions underlying colorectal cancer molecular subtypes.

Nat Commun. 2015 Nov 17;6:8878.

Colliva A, Pellegrini R, Testori A, Caselle M.

Ising-model description of long-range correlations in DNA sequences.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 May;91(5):052703.

Osella M, Riba A, Testori A, Cora' D, Caselle M.

Interplay of microRNA and epigenetic regulation in the human regulatory network.

Front Genet. 2014 Oct 6;5:345.

De Grassi A, Iannelli F, Cereda M, Volorio S, Melocchi V, Viel A, Basso G,
Laghi L, Caselle M, Ciccarelli FD.

Deep sequencing of the X chromosome reveals the proliferation history of colorectal adenomas.

Genome Biol. 2014 Aug 30;15(8):437.

Riba A, Bosia C, El Baroudi M, Ollino L, Caselle M.

A combination of transcriptional and microRNA regulation improves the stability of the relative concentrations of target genes.

PLoS Comput Biol. 2014 Feb 27;10(2):e1003490

Testori A, Caizzi L, Cutrupi S, Friard O, De Bortoli M, Cora' D, Caselle M.

The role of Transposable Elements in shaping the combinatorial interaction of Transcription Factors.

BMC Genomics. 2012 Aug 16;13:400.

Osella M, Bosia C, Cora' D, Caselle M.

The Role of Incoherent MicroRNA-Mediated Feedforward Loops in Noise Buffering.

PLoS Comput Biol 2011 Mar 8; 7(3): e1001101

Bosia C, Osella M, El Baroudi M, Cora' D, Caselle M

Gene autoregulation via intronic microRNAs and its functions.

BMC Syst Biol. 2012 Oct 10;6:131.

Re A, Cora' D, Taverna D, Caselle M

Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human.

Mol BioSyst. 2009 Aug;5(8):854-67.